allen institute / cell science / open ideas/

Idea Board

A living collection of early-stage ideas, proposals, and open questions from Allen Institute scientists.

actincomputational modeling
Compare actin filament compression between different fiber-scale simulators
by Jessica Yu · Saurabh Mogre — Actin compression simulation dataset
actincomputational modeling
Simulations of actin compression at monomer- and fiber-scale
by Jessica Yu · Saurabh Mogre — No public dataset
EMTmigration
Relate cell-cell junction remodeling to migration onset
by Gokhan Dalgin — Released EMT dataset
DEV ExampleEMTmigrationcell-cell junctions
Investigate role of cell-cell junctions in collective cell migration (dev example)
by Gokhan Dalgin · Caroline Hookway — Released EMT dataset
Measure stiffness in basement membrane and relate to migration onset
by Gokhan Dalgin — No public dataset
Is there an MET after cell migration in our 60 hr timelapse movies?
by Caroline Hookway — No public dataset
EMC
Investigate ECM-driven basement membrane production
by Gokhan Dalgin — No public dataset
EMT
How do the number and size of holes in the basement membrane change with time during EMT induction
by Caroline Hookway — Released EMT dataset